CDS

Accession Number TCMCG057C57165
gbkey CDS
Protein Id XP_018463329.1
Location complement(join(2990..3180,3263..3494,3697..3870,3965..4039))
Gene LOC108834490
GeneID 108834490
Organism Raphanus sativus

Protein

Length 223aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018607827.1
Definition PREDICTED: major centromere autoantigen B-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category U
Description Clathrin is the major protein of the polyhedral coat of coated pits and vesicles
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K04645        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04142        [VIEW IN KEGG]
ko04144        [VIEW IN KEGG]
ko04721        [VIEW IN KEGG]
ko04961        [VIEW IN KEGG]
ko05016        [VIEW IN KEGG]
ko05100        [VIEW IN KEGG]
map04142        [VIEW IN KEGG]
map04144        [VIEW IN KEGG]
map04721        [VIEW IN KEGG]
map04961        [VIEW IN KEGG]
map05016        [VIEW IN KEGG]
map05100        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005198        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006897        [VIEW IN EMBL-EBI]
GO:0006898        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009504        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009524        [VIEW IN EMBL-EBI]
GO:0009526        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009941        [VIEW IN EMBL-EBI]
GO:0012506        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0030117        [VIEW IN EMBL-EBI]
GO:0030118        [VIEW IN EMBL-EBI]
GO:0030120        [VIEW IN EMBL-EBI]
GO:0030125        [VIEW IN EMBL-EBI]
GO:0030135        [VIEW IN EMBL-EBI]
GO:0030136        [VIEW IN EMBL-EBI]
GO:0030276        [VIEW IN EMBL-EBI]
GO:0030659        [VIEW IN EMBL-EBI]
GO:0030662        [VIEW IN EMBL-EBI]
GO:0030665        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032050        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048475        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0072583        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098657        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCGGGAGGACGCAGCACCTGATGCCATGAGAGCATTTGGATTTGAGGAGCGTGTTATCAAGGAACTGCTAGAGTTGTATGGTGAGGGGGGATGGTTTCTGATCGAAGAGTTTAGTTACTCGGTGCTTCTAAATAAATGTCTTGAAAAGCAAGGAGAGCAAGACAATCATGTGGCTGAACAAGAAGAACAAGAAGAAATGGCTGAGGAACAAAACCTAGAGATGGCTCAGGAAGAAGAAACAGAAGAAGAGGATCAGCATCTTGAGGATGTAAGAGACAATATTGGTAGCAATTCAACAACTTTAGTGGGATGTGGTACTGAGACAGATACACAGACTTGCCAAACTGATGCTTTGTCGATCTCTAGCGAGACAGAGATCATGGACTCATCACCATCACCTTTTCCATCGGGAGAAGTAGAAGATTATGAATCACCAAAAGCTTTTCAGTCATCGGATTATGCACACCATTCTGTTGGAGGGGTCAAGAGATGTGGATGGCTAAGTGATGAGGAGGAGACAGATCCAGATGAGGATAGTGCTGTTGTTGATGATGATGATGAAATGATTCACCTGACTCCAGAACCGCTATGTGAAGAACTTAAAGAGCTGTTGAGGGAAGTACGTGGAGAGGAGAAGAAGAGGAAGAGACCCACGAGTTGGGCCACCTAA
Protein:  
MREDAAPDAMRAFGFEERVIKELLELYGEGGWFLIEEFSYSVLLNKCLEKQGEQDNHVAEQEEQEEMAEEQNLEMAQEEETEEEDQHLEDVRDNIGSNSTTLVGCGTETDTQTCQTDALSISSETEIMDSSPSPFPSGEVEDYESPKAFQSSDYAHHSVGGVKRCGWLSDEEETDPDEDSAVVDDDDEMIHLTPEPLCEELKELLREVRGEEKKRKRPTSWAT